HL_8UJC_024

3D structure

PDB id

8UJC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

GGGCCGAAACGAUCU

Length

15 nucleotides

Bulged bases

8UJC|1|L5|C|1762, 8UJC|1|L5|C|1763, 8UJC|1|L5|A|1765, 8UJC|1|L5|A|1766, 8UJC|1|L5|A|1767, 8UJC|1|L5|G|1769

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJC|1|L5|G|1759
8UJC|1|L5|G|1760
8UJC|1|L5|G|1761
8UJC|1|L5|C|1762
8UJC|1|L5|C|1763
8UJC|1|L5|G|1764
8UJC|1|L5|A|1765
8UJC|1|L5|A|1766
8UJC|1|L5|A|1767
8UJC|1|L5|C|1768
8UJC|1|L5|G|1769
8UJC|1|L5|A|1770
8UJC|1|L5|U|1771
8UJC|1|L5|C|1772
8UJC|1|L5|U|1773

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L11