HL_8UJC_043
3D structure
- PDB id
- 8UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- UGAACAG
- Length
- 7 nucleotides
- Bulged bases
- 8UJC|1|L5|C|2814
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UJC_043 not in the Motif Atlas
- Homologous match to HL_8P9A_153
- Geometric discrepancy: 0.0777
- The information below is about HL_8P9A_153
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
8UJC|1|L5|U|2810
8UJC|1|L5|G|2811
8UJC|1|L5|A|2812
8UJC|1|L5|A|2813
8UJC|1|L5|C|2814
8UJC|1|L5|A|2815
8UJC|1|L5|G|2816
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
Coloring options: