HL_8UJD_045
3D structure
- PDB id
- 8UJD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome with eIF6
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GGUGC
- Length
- 5 nucleotides
- Bulged bases
- 8UJD|1|L5|G|3615
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UJD_045 not in the Motif Atlas
- Homologous match to HL_8CRE_043
- Geometric discrepancy: 0.2226
- The information below is about HL_8CRE_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78677.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
8UJD|1|L5|G|3614
8UJD|1|L5|G|3615
8UJD|1|L5|U|3616
8UJD|1|L5|G|3617
8UJD|1|L5|C|3618
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L19
- Chain LW
- Ribosomal protein L24
Coloring options: