HL_8UJJ_021

3D structure

PDB id

8UJJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJJ|1|L5|C|1436
8UJJ|1|L5|C|1437
8UJJ|1|L5|U|1438
8UJJ|1|L5|C|1439
8UJJ|1|L5|U|1440
8UJJ|1|L5|C|1441
8UJJ|1|L5|C|1442
8UJJ|1|L5|A|1443
8UJJ|1|L5|G|1444
8UJJ|1|L5|U|1445
8UJJ|1|L5|C|1446
8UJJ|1|L5|C|1447
8UJJ|1|L5|G|1448

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain Lb

Large ribosomal subunit protein eL29