HL_8UJJ_081

3D structure

PDB id

8UJJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

8UJJ|1|L8|U|124

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJJ|1|L8|G|121
8UJJ|1|L8|G|122
8UJJ|1|L8|U|123
8UJJ|1|L8|U|124
8UJJ|1|L8|C|125
8UJJ|1|L8|C|126
8UJJ|1|L8|U|127
8UJJ|1|L8|C|128
8UJJ|1|L8|C|129

Current chains

Chain L8

5.8S rRNA [Homo sapiens]

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain LX

60S ribosomal protein L23a