HL_8UJJ_096

3D structure

PDB id

8UJJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

CUUUCG

Length

6 nucleotides

Bulged bases

8UJJ|1|S2|U|540, 8UJJ|1|S2|U|541

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJJ|1|S2|C|539
8UJJ|1|S2|U|540
8UJJ|1|S2|U|541
8UJJ|1|S2|U|542
8UJJ|1|S2|C|543
8UJJ|1|S2|G|544

Current chains

Chain S2

18S rRNA

Nearby chains