HL_8UJK_020

3D structure

PDB id

8UJK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

CGCGCUCG

Length

8 nucleotides

Bulged bases

8UJK|1|L5|G|1408, 8UJK|1|L5|U|1410, 8UJK|1|L5|C|1411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJK|1|L5|C|1405
8UJK|1|L5|G|1406
8UJK|1|L5|C|1407
8UJK|1|L5|G|1408
8UJK|1|L5|C|1409
8UJK|1|L5|U|1410
8UJK|1|L5|C|1411
8UJK|1|L5|G|1412

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lb

Large ribosomal subunit protein eL29