HL_8UJK_081

3D structure

PDB id

8UJK (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.54 Å

Loop

Sequence

GGUUCCUCC

Length

9 nucleotides

Bulged bases

8UJK|1|L8|U|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UJK|1|L8|G|121
8UJK|1|L8|G|122
8UJK|1|L8|U|123
8UJK|1|L8|U|124
8UJK|1|L8|C|125
8UJK|1|L8|C|126
8UJK|1|L8|U|127
8UJK|1|L8|C|128
8UJK|1|L8|C|129

Current chains

Chain L8

5.8S rRNA [Homo sapiens]

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain LX

60S ribosomal protein L23a