HL_8UQL_003
3D structure
- PDB id
- 8UQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- 8UQL|1|A|C|56, 8UQL|1|A|A|57
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UQL_003 not in the Motif Atlas
- Homologous match to HL_4V7M_034
- Geometric discrepancy: 0.3738
- The information below is about HL_4V7M_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UQL|1|A|G|53
8UQL|1|A|U|54
8UQL|1|A|U|55
8UQL|1|A|C|56
8UQL|1|A|A|57
8UQL|1|A|A|58
8UQL|1|A|A|59
8UQL|1|A|U|60
8UQL|1|A|C|61
Current chains
- Chain A
- E-site and P-site fMet-tRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: