HL_8URM_043

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8URM|1|1|U|1729, 8URM|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8URM_043 not in the Motif Atlas

Geometric match to HL_5J7L_214

Geometric discrepancy: 0.3095

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8URM|1|1|C|1727
8URM|1|1|C|1728
8URM|1|1|U|1729
8URM|1|1|C|1730
8URM|1|1|G|1731
8URM|1|1|C|1732
8URM|1|1|G|1733

Current chains

Chain 1

13S ribosomal RNA

Nearby chains