HL_8UTI_016
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- UGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UTI_016 not in the Motif Atlas
- Homologous match to HL_8P9A_128
- Geometric discrepancy: 0.1123
- The information below is about HL_8P9A_128
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
8UTI|1|A|U|707
8UTI|1|A|G|708
8UTI|1|A|A|709
8UTI|1|A|A|710
8UTI|1|A|A|711
8UTI|1|A|G|712
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LN
- 60S ribosomal protein L13-A
- Chain LS
- 60S ribosomal protein L18-A
- Chain Lc
- 60S ribosomal protein L28
- Chain Lk
- 60S ribosomal protein L36-A
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