HL_8UTI_050
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CAAAAGGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UTI_050 not in the Motif Atlas
- Homologous match to HL_8P9A_168
- Geometric discrepancy: 0.0942
- The information below is about HL_8P9A_168
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_52651.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 27
Unit IDs
8UTI|1|A|C|2693
8UTI|1|A|A|2694
8UTI|1|A|A|2695
8UTI|1|A|A|2696
8UTI|1|A|A|2697
8UTI|1|A|G|2698
8UTI|1|A|G|2699
8UTI|1|A|G|2700
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L10
- Chain LV
- 60S ribosomal protein L21-A
- Chain Lq
- 60S ribosomal protein L42-A
- Chain n
- Transfer RNA; tRNA
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