HL_8UTI_057

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_057 not in the Motif Atlas

Homologous match to HL_8P9A_175

Geometric discrepancy: 0.0939

The information below is about HL_8P9A_175

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

8UTI|1|A|C|2963
8UTI|1|A|G|2964
8UTI|1|A|U|2965
8UTI|1|A|G|2966
8UTI|1|A|A|2967
8UTI|1|A|G|2968

Current chains

Chain A

25S rRNA

Nearby chains

Chain LD

60S ribosomal protein L2-A

Chain n

Transfer RNA; tRNA