HL_8UTI_086

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_086 not in the Motif Atlas

Homologous match to HL_8P9A_210

Geometric discrepancy: 0.0959

The information below is about HL_8P9A_210

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

8UTI|1|E|C|937
8UTI|1|E|G|938
8UTI|1|E|A|939
8UTI|1|E|A|940
8UTI|1|E|A|941
8UTI|1|E|G|942

Current chains

Chain E

18S rRNA

Nearby chains

Chain SY

40S ribosomal protein S13

Chain Se

40S ribosomal protein S26-B