HL_8UTI_091
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- AUUGAGAGCU
- Length
- 10 nucleotides
- Bulged bases
- 8UTI|1|E|G|1243, 8UTI|1|E|G|1245
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UTI_091 not in the Motif Atlas
- Homologous match to HL_8P9A_216
- Geometric discrepancy: 0.2616
- The information below is about HL_8P9A_216
- Detailed Annotation
- GNRA wlth extra near cWW
- Broad Annotation
- GNRA wlth extra near cWW
- Motif group
- HL_45359.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8UTI|1|E|A|1238
8UTI|1|E|U|1239
8UTI|1|E|U|1240
8UTI|1|E|G|1241
8UTI|1|E|A|1242
8UTI|1|E|G|1243
8UTI|1|E|A|1244
8UTI|1|E|G|1245
8UTI|1|E|C|1246
8UTI|1|E|U|1247
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain SE
- 40S ribosomal protein S15
- Chain SM
- 40S ribosomal protein S29-A
- Chain SN
- 40S ribosomal protein S31
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