HL_8UTI_092

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AGUGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_092 not in the Motif Atlas

Homologous match to HL_8P9A_217

Geometric discrepancy: 0.0952

The information below is about HL_8P9A_217

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8UTI|1|E|A|1296
8UTI|1|E|G|1297
8UTI|1|E|U|1298
8UTI|1|E|G|1299
8UTI|1|E|A|1300
8UTI|1|E|U|1301

Current chains

Chain E

18S rRNA

Nearby chains

Chain SP

40S ribosomal protein S0-A

Chain SR

40S ribosomal protein S2