HL_8UTI_095

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

UUUCAAG

Length

7 nucleotides

Bulged bases

8UTI|1|E|U|1398, 8UTI|1|E|C|1399

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_095 not in the Motif Atlas

Homologous match to HL_8P9A_220

Geometric discrepancy: 0.3997

The information below is about HL_8P9A_220

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

13

Unit IDs

8UTI|1|E|U|1396
8UTI|1|E|U|1397
8UTI|1|E|U|1398
8UTI|1|E|C|1399
8UTI|1|E|A|1400
8UTI|1|E|A|1401
8UTI|1|E|G|1402

Current chains

Chain E

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S17-B