HL_8UTJ_016

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

8UTJ|1|1|U|546, 8UTJ|1|1|A|547, 8UTJ|1|1|G|548

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_016 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.1704

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

8UTJ|1|1|C|544
8UTJ|1|1|U|545
8UTJ|1|1|U|546
8UTJ|1|1|A|547
8UTJ|1|1|G|548
8UTJ|1|1|G|549

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein L21