HL_8UTJ_025

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAACCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_025 not in the Motif Atlas

Geometric match to HL_8B0X_056

Geometric discrepancy: 0.3143

The information below is about HL_8B0X_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67772.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

8UTJ|1|1|C|885
8UTJ|1|1|A|886
8UTJ|1|1|A|887
8UTJ|1|1|C|888
8UTJ|1|1|C|889
8UTJ|1|1|C|890
8UTJ|1|1|G|891

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S13