HL_8UTJ_080

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8UTJ|1|2|U|421, 8UTJ|1|2|C|422

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_080 not in the Motif Atlas

Geometric match to HL_4LFB_011

Geometric discrepancy: 0.1396

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

8UTJ|1|2|C|419
8UTJ|1|2|U|420
8UTJ|1|2|U|421
8UTJ|1|2|C|422
8UTJ|1|2|G|423
8UTJ|1|2|G|424

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain h

30S ribosomal protein S3

Chain i

30S ribosomal protein S4