HL_8UTJ_081

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8UTJ|1|2|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_081 not in the Motif Atlas

Geometric match to HL_5J7L_012

Geometric discrepancy: 0.1901

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8UTJ|1|2|G|462
8UTJ|1|2|U|463
8UTJ|1|2|U|464
8UTJ|1|2|A|465
8UTJ|1|2|A|466
8UTJ|1|2|U|467
8UTJ|1|2|A|468
8UTJ|1|2|C|469
8UTJ|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains