3D structure

PDB id
8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGUUAAUG
Length
8 nucleotides
Bulged bases
8UU5|1|A|U|590, 8UU5|1|A|U|593
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8UU5_017 not in the Motif Atlas
Homologous match to HL_4WF9_017
Geometric discrepancy: 0.154
The information below is about HL_4WF9_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_50318.1
Basepair signature
cWW-cSH-F-F
Number of instances in this motif group
1

Unit IDs

8UU5|1|A|C|587
8UU5|1|A|G|588
8UU5|1|A|U|589
8UU5|1|A|U|590
8UU5|1|A|A|591
8UU5|1|A|A|592
8UU5|1|A|U|593
8UU5|1|A|G|594

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain L
Large ribosomal subunit protein uL13
Chain T
Large ribosomal subunit protein bL21

Coloring options:


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