HL_8UU5_017

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

8UU5|1|A|U|590, 8UU5|1|A|U|593

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UU5_017 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.154

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

8UU5|1|A|C|587
8UU5|1|A|G|588
8UU5|1|A|U|589
8UU5|1|A|U|590
8UU5|1|A|A|591
8UU5|1|A|A|592
8UU5|1|A|U|593
8UU5|1|A|G|594

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL13

Chain T

Large ribosomal subunit protein bL21