3D structure

PDB id
8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CGAAUGGAAAUG
Length
12 nucleotides
Bulged bases
8UU5|1|A|A|1503, 8UU5|1|A|U|1504, 8UU5|1|A|U|1510
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UU5|1|A|C|1500
8UU5|1|A|G|1501
8UU5|1|A|A|1502
8UU5|1|A|A|1503
8UU5|1|A|U|1504
8UU5|1|A|G|1505
8UU5|1|A|G|1506
8UU5|1|A|A|1507
8UU5|1|A|A|1508
8UU5|1|A|A|1509
8UU5|1|A|U|1510
8UU5|1|A|G|1511

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain P
Large ribosomal subunit protein bL17

Coloring options:

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