HL_8UU5_066

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

8UU5|1|A|A|2849

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UU5_066 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0947

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8UU5|1|A|A|2848
8UU5|1|A|A|2849
8UU5|1|A|A|2850
8UU5|1|A|G|2851
8UU5|1|A|A|2852
8UU5|1|A|U|2853
8UU5|1|A|G|2854
8UU5|1|A|A|2855
8UU5|1|A|U|2856

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain D

Large ribosomal subunit protein uL3

Chain P

Large ribosomal subunit protein bL17