HL_8UU5_098
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 8UU5|1|a|U|1371
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU5_098 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1198
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8UU5|1|a|G|1363
8UU5|1|a|A|1364
8UU5|1|a|U|1365
8UU5|1|a|C|1366
8UU5|1|a|A|1367
8UU5|1|a|G|1368
8UU5|1|a|C|1369
8UU5|1|a|A|1370
8UU5|1|a|U|1371
8UU5|1|a|G|1372
8UU5|1|a|C|1373
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain i
- Small ribosomal subunit protein uS9
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14
Coloring options: