HL_8UU5_101
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU5_101 not in the Motif Atlas
- Homologous match to HL_1B23_002
- Geometric discrepancy: 0.3173
- The information below is about HL_1B23_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU5|1|x|G|30
8UU5|1|x|A|31
8UU5|1|x|PSU|32
8UU5|1|x|U|33
8UU5|1|x|G|34
8UU5|1|x|A|35
8UU5|1|x|A|36
8UU5|1|x|MIA|37
8UU5|1|x|A|38
8UU5|1|x|PSU|39
8UU5|1|x|C|40
Current chains
- Chain x
- pe/E Hybrid State Phenylalanine tRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- Small ribosomal subunit protein uS9
- Chain k
- Small ribosomal subunit protein uS11
- Chain m
- Small ribosomal subunit protein uS13
- Chain w
- F-Stop mRNA
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