HL_8UU6_014

3D structure

PDB id

8UU6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8UU6|1|A|G|457

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UU6_014 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1316

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

8UU6|1|A|G|456
8UU6|1|A|G|457
8UU6|1|A|A|458
8UU6|1|A|C|459
8UU6|1|A|C|460
8UU6|1|A|A|461
8UU6|1|A|U|462
8UU6|1|A|C|463

Current chains

Chain A

23S Ribosomal RNA

Nearby chains