HL_8UU6_068
3D structure
- PDB id
- 8UU6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 8UU6|1|B|C|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU6_068 not in the Motif Atlas
- Homologous match to HL_5J7L_203
- Geometric discrepancy: 0.2076
- The information below is about HL_5J7L_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8UU6|1|B|C|36
8UU6|1|B|A|37
8UU6|1|B|U|38
8UU6|1|B|C|39
8UU6|1|B|C|40
8UU6|1|B|C|41
8UU6|1|B|G|42
Current chains
- Chain B
- 5S Ribosomal RNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL31B
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain Q
- Large ribosomal subunit protein uL18
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