HL_8UU7_049
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 8UU7|1|A|A|2063, 8UU7|1|A|A|2064, 8UU7|1|A|G|2065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU7_049 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.1248
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8UU7|1|A|G|2060
8UU7|1|A|U|2061
8UU7|1|A|G|2062
8UU7|1|A|A|2063
8UU7|1|A|A|2064
8UU7|1|A|G|2065
8UU7|1|A|A|2066
8UU7|1|A|U|2067
8UU7|1|A|G|2068
8UU7|1|A|C|2069
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL32
- Chain D
- Large ribosomal subunit protein uL3
- Chain T
- Large ribosomal subunit protein bL21
Coloring options: