HL_8UU9_102
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 8UU9|1|x|U|33
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU9_102 not in the Motif Atlas
- Homologous match to HL_1B23_002
- Geometric discrepancy: 0.3562
- The information below is about HL_1B23_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU9|1|x|G|30
8UU9|1|x|A|31
8UU9|1|x|PSU|32
8UU9|1|x|U|33
8UU9|1|x|G|34
8UU9|1|x|A|35
8UU9|1|x|A|36
8UU9|1|x|MIA|37
8UU9|1|x|A|38
8UU9|1|x|PSU|39
8UU9|1|x|C|40
Current chains
- Chain x
- pe/E Hybrid State Phenylalanine tRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- Small ribosomal subunit protein uS9
- Chain m
- Small ribosomal subunit protein uS13
- Chain w
- F-Stop mRNA
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