HL_8UVS_156
3D structure
- PDB id
- 8UVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UVS_156 not in the Motif Atlas
- Homologous match to HL_8VTW_045
- Geometric discrepancy: 0.0608
- The information below is about HL_8VTW_045
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8UVS|1|2A|C|1806
8UVS|1|2A|G|1807
8UVS|1|2A|U|1808
8UVS|1|2A|A|1809
8UVS|1|2A|A|1810
8UVS|1|2A|G|1811
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L28
- Chain 2D
- 50S ribosomal protein L2
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