HL_8UVS_229

3D structure

PDB id

8UVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin derivative 2694, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

8UVS|1|2A|G|892, 8UVS|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UVS|1|2A|G|880
8UVS|1|2A|G|881
8UVS|1|2A|G|882
8UVS|1|2A|G|883
8UVS|1|2A|C|884
8UVS|1|2A|C|885
8UVS|1|2A|C|886
8UVS|1|2A|A|887
8UVS|1|2A|C|888
8UVS|1|2A|C|889
8UVS|1|2A|A|890
8UVS|1|2A|G|892
8UVS|1|2A|C|893
8UVS|1|2A|C|894
8UVS|1|2A|U|895
8UVS|1|2A|A|896
8UVS|1|2A|C|897

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Z

50S ribosomal protein L25

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA