HL_8UX8_051

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

8UX8|1|1|C|2145, 8UX8|1|1|C|2146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UX8_051 not in the Motif Atlas

Geometric match to HL_5J7L_025

Geometric discrepancy: 0.3034

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8UX8|1|1|C|2143
8UX8|1|1|G|2144
8UX8|1|1|C|2145
8UX8|1|1|C|2146
8UX8|1|1|A|2147
8UX8|1|1|G|2148

Current chains

Chain 1

23S rRNA

Nearby chains