HL_8UX8_078

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8UX8|1|2|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UX8_078 not in the Motif Atlas

Geometric match to HL_7KKV_002

Geometric discrepancy: 0.1153

The information below is about HL_7KKV_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

8UX8|1|2|C|342
8UX8|1|2|U|343
8UX8|1|2|A|344
8UX8|1|2|C|345
8UX8|1|2|G|346
8UX8|1|2|G|347

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

Large ribosomal subunit protein bL19