HL_8UXA_001

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAAAC

Length

6 nucleotides

Bulged bases

8UXA|1|A|A|155

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_001 not in the Motif Atlas

Geometric match to HL_9DFE_003

Geometric discrepancy: 0.1238

The information below is about HL_9DFE_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82710.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8UXA|1|A|G|153
8UXA|1|A|U|154
8UXA|1|A|A|155
8UXA|1|A|A|156
8UXA|1|A|A|157
8UXA|1|A|C|158

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain 3

Large ribosomal subunit protein mL41

Chain P

Large ribosomal subunit protein uL23m

Chain Q

Large ribosomal subunit protein uL24m

Chain Y

Large ribosomal subunit protein bL34m