3D structure

PDB id
8UXA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UGAACUGAAACAUCUAAGUAA
Length
21 nucleotides
Bulged bases
8UXA|1|A|A|236, 8UXA|1|A|A|239
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UXA|1|A|U|228
8UXA|1|A|G|229
8UXA|1|A|A|230
8UXA|1|A|A|231
8UXA|1|A|C|232
8UXA|1|A|U|233
8UXA|1|A|G|234
8UXA|1|A|A|235
8UXA|1|A|A|236
8UXA|1|A|A|237
8UXA|1|A|C|238
8UXA|1|A|A|239
8UXA|1|A|U|240
8UXA|1|A|C|241
8UXA|1|A|U|242
8UXA|1|A|A|243
8UXA|1|A|A|244
8UXA|1|A|G|245
8UXA|1|A|U|246
8UXA|1|A|A|247
8UXA|1|A|A|248

Current chains

Chain A
Large ribosomal subunit rRNA

Nearby chains

Chain J
Large ribosomal subunit protein uL15m
Chain S
Large ribosomal subunit protein bL28m

Coloring options:

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