HL_8UXA_047

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_047 not in the Motif Atlas

Geometric match to HL_2OIU_001

Geometric discrepancy: 0.1917

The information below is about HL_2OIU_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

8UXA|1|A|C|2925
8UXA|1|A|G|2926
8UXA|1|A|C|2927
8UXA|1|A|A|2928
8UXA|1|A|A|2929
8UXA|1|A|G|2930

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain F

Large ribosomal subunit protein uL6m