HL_8UXA_053

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUAAGAGUU

Length

10 nucleotides

Bulged bases

8UXA|1|AL|G|270

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_053 not in the Motif Atlas

Homologous match to HL_6CZR_077

Geometric discrepancy: 0.5351

The information below is about HL_6CZR_077

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8UXA|1|AL|A|263
8UXA|1|AL|U|264
8UXA|1|AL|U|265
8UXA|1|AL|A|266
8UXA|1|AL|A|267
8UXA|1|AL|G|268
8UXA|1|AL|A|269
8UXA|1|AL|G|270
8UXA|1|AL|U|271
8UXA|1|AL|U|272

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain w

37S ribosomal protein S17, mitochondrial