HL_8UXA_054
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_054 not in the Motif Atlas
- Homologous match to HL_6CZR_078
- Geometric discrepancy: 0.2401
- The information below is about HL_6CZR_078
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8UXA|1|AL|U|302
8UXA|1|AL|G|303
8UXA|1|AL|A|304
8UXA|1|AL|A|305
8UXA|1|AL|A|306
8UXA|1|AL|G|307
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein mS45
- Chain AH
- Small ribosomal subunit protein mS26
- Chain j
- 37S ribosomal protein NAM9, mitochondrial
- Chain k
- Small ribosomal subunit protein uS5m
- Chain n
- 37S ribosomal protein S8, mitochondrial
- Chain w
- 37S ribosomal protein S17, mitochondrial
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