HL_8UXA_057

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_057 not in the Motif Atlas

Homologous match to HL_6CZR_081

Geometric discrepancy: 0.1731

The information below is about HL_6CZR_081

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8UXA|1|AL|C|383
8UXA|1|AL|G|384
8UXA|1|AL|A|385
8UXA|1|AL|A|386
8UXA|1|AL|A|387
8UXA|1|AL|G|388

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AB

Small ribosomal subunit protein mS41

Chain v

Small ribosomal subunit protein bS16m