HL_8UXA_058
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAUUAAA
- Length
- 8 nucleotides
- Bulged bases
- 8UXA|1|AL|U|495, 8UXA|1|AL|A|496
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_058 not in the Motif Atlas
- Geometric match to HL_9DFE_017
- Geometric discrepancy: 0.3221
- The information below is about HL_9DFE_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99456.1
- Basepair signature
- cWW-tSS-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8UXA|1|AL|U|491
8UXA|1|AL|G|492
8UXA|1|AL|A|493
8UXA|1|AL|U|494
8UXA|1|AL|U|495
8UXA|1|AL|A|496
8UXA|1|AL|A|497
8UXA|1|AL|A|498
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein mS45
- Chain AJ
- Small ribosomal subunit protein mS33
- Chain i
- Ribosomal protein VAR1, mitochondrial
- Chain j
- 37S ribosomal protein NAM9, mitochondrial
Coloring options: