HL_8UXA_066
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUAAUCCAC
- Length
- 10 nucleotides
- Bulged bases
- 8UXA|1|AL|A|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_066 not in the Motif Atlas
- Homologous match to HL_6CZR_092
- Geometric discrepancy: 0.3041
- The information below is about HL_6CZR_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8UXA|1|AL|G|1028
8UXA|1|AL|A|1029
8UXA|1|AL|U|1030
8UXA|1|AL|A|1031
8UXA|1|AL|A|1032
8UXA|1|AL|U|1033
8UXA|1|AL|C|1034
8UXA|1|AL|C|1035
8UXA|1|AL|A|1036
8UXA|1|AL|C|1037
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AM
- Transfer RNA; tRNA
- Chain o
- Small ribosomal subunit protein uS9m
- Chain p
- Small ribosomal subunit protein uS10m
- Chain t
- 37S ribosomal protein MRP2, mitochondrial
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