HL_8UXA_069
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AAUUUUAAUU
- Length
- 10 nucleotides
- Bulged bases
- 8UXA|1|AL|A|1172, 8UXA|1|AL|U|1174, 8UXA|1|AL|U|1175, 8UXA|1|AL|U|1176, 8UXA|1|AL|A|1177, 8UXA|1|AL|U|1179
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_069 not in the Motif Atlas
- Geometric match to HL_2ZUE_002
- Geometric discrepancy: 0.1784
- The information below is about HL_2ZUE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56131.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
8UXA|1|AL|A|1171
8UXA|1|AL|A|1172
8UXA|1|AL|U|1173
8UXA|1|AL|U|1174
8UXA|1|AL|U|1175
8UXA|1|AL|U|1176
8UXA|1|AL|A|1177
8UXA|1|AL|A|1178
8UXA|1|AL|U|1179
8UXA|1|AL|U|1180
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AK
- Small ribosomal subunit protein mS35
- Chain k
- Small ribosomal subunit protein uS5m
- Chain o
- Small ribosomal subunit protein uS9m
- Chain p
- Small ribosomal subunit protein uS10m
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