HL_8UXA_076

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACUCAUAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_076 not in the Motif Atlas

Homologous match to HL_5J8B_109

Geometric discrepancy: 0.1639

The information below is about HL_5J8B_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81376.3

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

43

Unit IDs

8UXA|1|AM|A|31
8UXA|1|AM|C|32
8UXA|1|AM|U|33
8UXA|1|AM|C|34
8UXA|1|AM|A|35
8UXA|1|AM|U|36
8UXA|1|AM|A|37
8UXA|1|AM|A|38
8UXA|1|AM|U|39

Current chains

Chain AM

Small ribosomal subunit tRNA

Nearby chains

Chain AL

Small subunit ribosomal RNA; SSU rRNA

Chain AN

mRNA

Chain o

Small ribosomal subunit protein uS9m