HL_8UXB_046

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

8UXB|1|1|C|1870, 8UXB|1|1|A|1871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXB_046 not in the Motif Atlas

Geometric match to HL_6N5P_002

Geometric discrepancy: 0.2812

The information below is about HL_6N5P_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72800.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8UXB|1|1|C|1868
8UXB|1|1|G|1869
8UXB|1|1|C|1870
8UXB|1|1|A|1871
8UXB|1|1|A|1872
8UXB|1|1|G|1873

Current chains

Chain 1

23S ribosomal RNA

Nearby chains