HL_8UXB_054
3D structure
- PDB id
- 8UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUCGGACAU
- Length
- 9 nucleotides
- Bulged bases
- 8UXB|1|1|U|2305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXB_054 not in the Motif Atlas
- Geometric match to HL_9DFE_198
- Geometric discrepancy: 0.2086
- The information below is about HL_9DFE_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02452.1
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
8UXB|1|1|G|2304
8UXB|1|1|U|2305
8UXB|1|1|C|2306
8UXB|1|1|G|2307
8UXB|1|1|G|2308
8UXB|1|1|A|2309
8UXB|1|1|C|2310
8UXB|1|1|A|2311
8UXB|1|1|U|2312
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L5
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