HL_8UZG_090

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZG_090 not in the Motif Atlas

Geometric match to HL_7A0S_005

Geometric discrepancy: 0.3561

The information below is about HL_7A0S_005

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

8UZG|1|2|A|1012
8UZG|1|2|G|1013
8UZG|1|2|A|1014
8UZG|1|2|G|1015
8UZG|1|2|A|1016
8UZG|1|2|U|1017

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14

Chain x

30S ribosomal protein S19