HL_8UZG_097

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAUCAGAAUGC

Length

11 nucleotides

Bulged bases

8UZG|1|2|C|1359, 8UZG|1|2|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZG_097 not in the Motif Atlas

Geometric match to HL_4LFB_030

Geometric discrepancy: 0.2438

The information below is about HL_4LFB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86432.1

Basepair signature

cWW-tWH-tWH-F-F-F

Number of instances in this motif group

5

Unit IDs

8UZG|1|2|G|1356
8UZG|1|2|A|1357
8UZG|1|2|U|1358
8UZG|1|2|C|1359
8UZG|1|2|A|1360
8UZG|1|2|G|1361
8UZG|1|2|A|1362
8UZG|1|2|A|1363
8UZG|1|2|U|1364
8UZG|1|2|G|1365
8UZG|1|2|C|1366

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S9

Chain o

30S ribosomal protein S10

Chain s

30S ribosomal protein S14