HL_8V03_042

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8V03|1|1|U|1729, 8V03|1|1|C|1730, 8V03|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8V03_042 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2554

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8V03|1|1|C|1727
8V03|1|1|C|1728
8V03|1|1|U|1729
8V03|1|1|C|1730
8V03|1|1|G|1731
8V03|1|1|C|1732
8V03|1|1|G|1733

Current chains

Chain 1

23S ribosomal RNA

Nearby chains