HL_8V03_079

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8V03|1|2|U|421, 8V03|1|2|C|422

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8V03_079 not in the Motif Atlas

Geometric match to HL_5J7L_030

Geometric discrepancy: 0.2223

The information below is about HL_5J7L_030

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8V03|1|2|C|419
8V03|1|2|U|420
8V03|1|2|U|421
8V03|1|2|C|422
8V03|1|2|G|423
8V03|1|2|G|424

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain h

Small ribosomal subunit protein uS3

Chain i

30S ribosomal protein S4